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1

ChIP-seq accurately predicts tissue-specific activity of enhancers

Visel, Axel, Blow, Matthew J., Li, Zirong, Zhang, Tao, Akiyama, Jennifer A., Holt, Amy, Plajzer-Frick, Ingrid, Shoukry, Malak, Wright, Crystal, Chen, Feng

Journal:

Year:

2009

Language:

english

File:

PDF, 538 KB

english, 2009

2

Ultraconservation identifies a small subset of extremely constrained developmental enhancers

Rubin, Edward M, Pennacchio, Len A, Visel, Axel, Prabhakar, Shyam, Akiyama, Jennifer A, Shoukry, Malak, Lewis, Keith D, Holt, Amy, Plajzer-Frick, Ingrid, Afzal, Veena

Journal:

Nature Genetics

Year:

2008

Language:

english

File:

PDF, 252 KB

english, 2008

3

Rapid and Pervasive Changes in Genome-wide Enhancer Usage during Mammalian Development

Nord, Alex S., Blow, Matthew J., Attanasio, Catia, Akiyama, Jennifer A., Holt, Amy, Hosseini, Roya, Phouanenavong, Sengthavy, Plajzer-Frick, Ingrid, Shoukry, Malak, Afzal, Veena, Rubenstein, John L.R.

Journal:

Year:

2013

Language:

english

File:

PDF, 3.00 MB

english, 2013

4

Impact of Positive and Negative Aspects of Marital Relationships and Friendships on Well-Being of Older Adults

Antonucci, Toni C., Lansford, Jennifer E., Akiyama, Hiroko

Journal:

Applied Developmental Science

Year:

2001

Language:

english

File:

PDF, 123 KB

english, 2001

5

Negative Effects of Close Social Relations

Antonucci, Toni C., Akiyama, Hiroko, Lansford, Jennifer E.

Journal:

Family Relations

Year:

1998

Language:

english

File:

PDF, 1.54 MB

english, 1998

6

Undocumented African Immigrants' Experiences of HIV Testing and Linkage to Care

Ross, Jonathan, Akiyama, Matthew J., Slawek, Deepika, Stella, Jennifer, Nichols, Kim, Bekele, Mulusew, Cunningham, Chinazo O., Blackstock, Oni J.

Journal:

AIDS PATIENT CARE and STDs

Year:

2019

Language:

english

File:

PDF, 128 KB

english, 2019

7

A Quantitative and Qualitative Approach to Social Relationships and Well-Being in the United States and Japan

Lansford, Jennifer E., Antonucci, Toni C., Akiyama, Hiroko, Takahashi, Keiko

Journal:

Journal of Comparative Family Studies

Year:

2005

File:

PDF, 423 KB

2005

8

Differences Between Men and Women in Social Relations, Resource Deficits, and Depressive Symptomatology During Later Life in Four Nations

Toni C. Antonucci, Jennifer E. Lansford, Hiroko Akiyama, Jacqui Smith, Margret M. Baltes, Keiko Takahashi, Rebecca Fuhrer, Jean–François Dartigues

Journal:

Journal of Social Issues

Year:

2002

Language:

english

File:

PDF, 87 KB

english, 2002

9

BCL2 inhibits cell adhesion, spreading, and motility by enhancing actin polymerization

Ke, Hengning, Parron, Vandy I, Reece, Jeff, Zhang, Jennifer Y, Akiyama, Steven K, French, John E

Journal:

Year:

2010

Language:

english

File:

PDF, 881 KB

english, 2010

10

ChIP-Seq identification of weakly conserved heart enhancers

Blow, Matthew J, McCulley, David J, Li, Zirong, Zhang, Tao, Akiyama, Jennifer A, Holt, Amy, Plajzer-Frick, Ingrid, Shoukry, Malak, Wright, Crystal, Chen, Feng

Journal:

Nature Genetics

Year:

2010

Language:

english

File:

PDF, 656 KB

english, 2010

11

In vivo characterization of human APOA5 haplotypes

Nadav Ahituv, Jennifer Akiyama, Audrey Chapman-Helleboid, Jamila Fruchart, Len A. Pennacchio

Journal:

Year:

2007

Language:

english

File:

PDF, 255 KB

english, 2007

12

Functional autonomy of distant-acting human enhancers

Axel Visel, Jennifer A. Akiyama, Malak Shoukry, Veena Afzal, Edward M. Rubin, Len A. Pennacchio

Journal:

Year:

2009

Language:

english

File:

PDF, 681 KB

english, 2009

13

Effective Acid Suppression is Important in Squamous Reepithelialization After Radiofrequency Ablation of Barrett's Esophagus

Junichi Akiyama, Jennifer Vassalle, Samuel N. Marcus, George Triadafilopoulos

Journal:

Gastroenterology

Year:

2011

Language:

english

File:

PDF, 225 KB

english, 2011

14

Function-based identification of mammalian enhancers using site-specific integration

Dickel, Diane E, Zhu, Yiwen, Nord, Alex S, Wylie, John N, Akiyama, Jennifer A, Afzal, Veena, Plajzer-Frick, Ingrid, Kirkpatrick, Aileen, Göttgens, Berthold, Bruneau, Benoit G, Visel, Axel, Pennacchio,

Journal:

Year:

2014

Language:

english

File:

PDF, 793 KB

english, 2014

15

Tu1109 Large Hiatal Hernia and Long Segment Barrett's Esophagus are Associated With Delayed Response to Radiofrequency Ablation

Akiyama, Junichi, Chun, Carlene L., Aulakh, Sabreen, Yen, Becky, Vassalle, Jennifer, Marcus, Samuel N., Triadafilopoulos, George

Journal:

Gastroenterology

Year:

2012

Language:

english

File:

PDF, 89 KB

english, 2012

16

Mutations in the AAGAB gene, encoding alpha- and gamma-adaptin binding protein p34, cause punctate palmoplantar keratoderma type 1

Pohler, Elizabeth, Nomura, Toshifumi, Akiyama, Masashi, Suehiro, Akihiro, Shimizu, Hiroshi, Mamai, Ons, Zamiri, Mozheh, Horn, Helen, Irvine, Alan D., Hirst, Jennifer, Robinson, Margaret S., McGrath, J

Journal:

Journal of Dermatological Science

Year:

2013

Language:

english

File:

PDF, 65 KB

english, 2013

17

Altered Surfactant Homeostasis and Alveolar Type II Cell Morphology in Mice Lacking Surfactant Protein D

Carlos Botas, Francis Poulain, Jennifer Akiyama, Cindy Brown, Lennell Allen, Jon Goerke, John Clements, Elaine Carlson, Anne Marie Gillespie, Charles Epstein and Samuel Hawgood

Journal:

Proceedings of the National Academy of Sciences

Year:

1998

Language:

english

File:

PDF, 1.72 MB

english, 1998

18

Dachsous-Dependent Asymmetric Localization of Spiny-Legs Determines Planar Cell Polarity Orientation in Drosophila

Ayukawa, Tomonori, Akiyama, Masakazu, Mummery-Widmer, Jennifer L., Stoeger, Thomas, Sasaki, Junko, Knoblich, Juergen A., Senoo, Haruki, Sasaki, Takehiko, Yamazaki, Masakazu

Journal:

Year:

2014

Language:

english

File:

PDF, 4.15 MB

english, 2014

19

Large-scale discovery of enhancers from human heart tissue

May, Dalit, Blow, Matthew J, Kaplan, Tommy, McCulley, David J, Jensen, Brian C, Akiyama, Jennifer A, Holt, Amy, Plajzer-Frick, Ingrid, Shoukry, Malak, Wright, Crystal, Afzal, Veena, Simpson, Paul C, R

Journal:

Nature Genetics

Year:

2011

Language:

english

File:

PDF, 668 KB

english, 2011

20

Dynamic GATA4 enhancers shape the chromatin landscape central to heart development and disease

He, Aibin, Gu, Fei, Hu, Yong, Ma, Qing, Yi Ye, Lillian, Akiyama, Jennifer A., Visel, Axel, Pennacchio, Len A., Pu, William T.

Journal:

Nature Communications

Year:

2014

Language:

english

File:

PDF, 1.77 MB

english, 2014

21

Tissue-Specific RNA Expression Marks Distant-Acting Developmental Enhancers

Wu, Han, Nord, Alex S., Akiyama, Jennifer A., Shoukry, Malak, Afzal, Veena, Rubin, Edward M., Pennacchio, Len A., Visel, Axel, Barsh, Gregory S.

Journal:

Year:

2014

Language:

english

File:

PDF, 2.65 MB

english, 2014

22

CYLD Inhibits Melanoma Growth and Progression through Suppression of the JNK/AP-1 and β1-Integrin Signaling Pathways

Ke, Hengning, Augustine, Christina K, Gandham, Vineela D, Jin, Jane Y, Tyler, Douglas S, Akiyama, Steven K, Hall, Russell P, Zhang, Jennifer Y

Journal:

The Journal of Investigative Dermatology

Year:

2013

Language:

english

File:

PDF, 27.69 MB

english, 2013

23

BCL2 interaction with actin in vitro may inhibit cell motility by enhancing actin polymerization

Ke, Hengning, Zhang, Jennifer Y., Akiyama, Steven K., French, John E.

Journal:

Cell Adhesion & Migration

Year:

2011

Language:

english

File:

PDF, 1.48 MB

english, 2011

24

Ultrastructure of Phospholipid Mixtures Reconstituted with Surfactant Proteins B and D

Poulain, Francis R., Akiyama, Jennifer, Allen, Lennell, Brown, Cindy, Chang, Rupert, Goerke, Jon, Dobbs, Leland, Hawgood, Sam

Journal:

American Journal of Respiratory Cell and Molecular Biology

Year:

1999

Language:

english

File:

PDF, 2.97 MB

english, 1999

25

Surfactant Protein-A–Deficient Mice Display an Exaggerated Early Inflammatory Response to a β -Resistant Strain of Influenza A Virus

Li, Gordon, Siddiqui, Jiyauddin, Hendry, Michael, Akiyama, Jennifer, Edmondson, Jess, Brown, Cynthia, Allen, Lennell, Levitt, Stacey, Poulain, Francis, Hawgood, Samuel

Journal:

American Journal of Respiratory Cell and Molecular Biology

Year:

2002

Language:

english

File:

PDF, 166 KB

english, 2002

26

Characterization of the Mouse Collectin Gene Locus

Akiyama, Jennifer, Volik, Stanislav V., Plajzer-Frick, Ingrid, Prince, Amy, Sago, Haruhiko, Weier, Heinz-Ulrich G., Vanderbilt, Jeff N., Hawgood, Sam, Poulain, Francis R.

Journal:

American Journal of Respiratory Cell and Molecular Biology

Year:

1999

Language:

english

File:

PDF, 189 KB

english, 1999

27

A Quantitative and Qualitative Approach to Social Relationships and Well-Being in the United States and Japan

JENNIFER E. LANSFORD, TONI C. ANTONUCCI, HIROKO AKIYAMA and KEIKO TAKAHASHI

Journal:

Journal of Comparative Family Studies

Year:

2005

Language:

english

File:

PDF, 1.71 MB

english, 2005

28

A distal 594bp ECR specifies Hmx1 expression in pinna and lateral facial morphogenesis and is regulated by Hox-Pbx-Meis

Rosin, Jessica M., Li, Wenjie, Cox, Liza L., Rolfe, Sara M., Latorre, Victor, Akiyama, Jennifer A., Visel, Axel, Kuramoto, Takashi, Bobola, Nicoletta, Turner, Eric E., Cox, Timothy C.

Journal:

Development (The Company of Biologists)

Year:

2016

Language:

english

File:

PDF, 2.29 MB

english, 2016

29

Widowhood and illness: A comparison of social network characteristics in France, Germany, Japan, and the United States.

Antonucci, Toni C., Lansford, Jennifer E., Schaberg, Lynne, Smith, Jacqui, Baltes, Margret, Akiyama, Hiroko, Takahashi, Keiko, Fuhrer, Rebecca, Dartigues, Jean-Francois

Journal:

Psychology and Aging

Year:

2001

Language:

english

File:

PDF, 1.86 MB

english, 2001

30

NEAR-IR HIGH-RESOLUTION IMAGING POLARIMETRY OF THE SU Aur DISK: CLUES FOR TIDAL TAILS?

Leon, Jerome de, Takami, Michihiro, Karr, Jennifer L., Hashimoto, Jun, Kudo, Tomoyuki, Sitko, Michael, Mayama, Satoshi, Kusakabe, Nobuyuki, Akiyama, Eiji, Liu, Hauyu Baobab, Usuda, Tomonori, Abe, Lyu,

Journal:

The Astrophysical Journal

Year:

2015

File:

PDF, 688 KB

2015

31

Sequential targeted deficiency of SP-A and -D leads to progressive alveolar lipoproteinosis and emphysema

Hawgood, Samuel, Ochs, Matthias, Jung, Anja, Akiyama, Jennifer, Allen, Lennell, Brown, Cindy, Edmondson, Jess, Levitt, Stacey, Carlson, Elaine, Gillespie, Anne Marie, Villar, Angela, Epstein, Charles

Journal:

American journal of physiology. Lung cellular and molecular physiology

Year:

2002

Language:

english

File:

PDF, 695 KB

english, 2002

32

HAND2 Target Gene Regulatory Networks Control Atrioventricular Canal and Cardiac Valve Development

Laurent, Frédéric, Girdziusaite, Ausra, Gamart, Julie, Barozzi, Iros, Osterwalder, Marco, Akiyama, Jennifer A., Lincoln, Joy, Lopez-Rios, Javier, Visel, Axel, Zuniga, Aimée, Zeller, Rolf

Journal:

Year:

2017

Language:

english

File:

PDF, 5.33 MB

english, 2017

33

SPIRAL STRUCTURE AND DIFFERENTIAL DUST SIZE DISTRIBUTION IN THE LkH α 330 DISK

Akiyama, Eiji, Hashimoto, Jun, Liu, Hauyu baobabu, Li, Jennifer i-hsiu, Bonnefoy, Michael, Dong, Ruobing, Hasegawa, Yasuhiro, Henning, Thomas, Sitko, Michael L., Janson, Markus, Feldt, Markus, Wisniew

Journal:

The Astronomical Journal

Year:

2016

File:

PDF, 1.74 MB

2016

34

Novel Care Pathway for Patients Presenting to the Emergency Department With Atrial Fibrillation

Gehi, Anil K., Deyo, Zachariah, Mendys, Philip, Hatfield, Leah, Laux, Jeffrey, Walker, T. Jennifer, Chen, Sarah, O’Bryan, James, Garner, Kelly, Sears, Samuel F., Akiyama, Jill, Stearns, Sally C., Bies

Journal:

Circulation Cardiovascular Quality and Outcomes

Year:

2018

Language:

english

File:

PDF, 490 KB

english, 2018

35

Limb-Enhancer Genie: An accessible resource of accurate enhancer predictions in the developing limb

Monti, Remo, Barozzi, Iros, Osterwalder, Marco, Lee, Elizabeth, Kato, Momoe, Garvin, Tyler H., Plajzer-Frick, Ingrid, Pickle, Catherine S., Akiyama, Jennifer A., Afzal, Veena, Beerenwinkel, Niko, Dick

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 5.24 MB

english, 2017

36

HIV-1 intron-containing RNA expression induces innate immune activation and T cell dysfunction

Akiyama, Hisashi, Miller, Caitlin M., Ettinger, Chelsea R., Belkina, Anna C., Snyder-Cappione, Jennifer E., Gummuluru, Suryaram

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 1.38 MB

english, 2018

37

GM-CSF mediates alveolar macrophage proliferation and type II cell hypertrophy in SP-D gene-targeted mice

Hawgood, Samuel, Akiyama, Jennifer, Brown, Cynthia, Allen, Lennell, Li, Gordon, Poulain, Francis R.

Journal:

American journal of physiology. Lung cellular and molecular physiology

Year:

2001

File:

PDF, 1.50 MB

2001

38

GM-CSF mediates alveolar macrophage proliferation and type II cell hypertrophy in SP-D gene-targeted mice

Hawgood, Samuel, Akiyama, Jennifer, Brown, Cynthia, Allen, Lennell, Li, Gordon, Poulain, Francis R.

Journal:

American journal of physiology. Lung cellular and molecular physiology

Year:

2001

Language:

english

File:

PDF, 1.50 MB

english, 2001

39

Low Hepatitis C Reinfection Following Direct-Acting Antiviral Therapy Among People Who Inject Drugs on Opioid Agonist Therapy

Akiyama, Matthew J, Lipsey, Daniel, Heo, Moonseong, Agyemang, Linda, Norton, Brianna L, Hidalgo, Jennifer, Lora, Kiara, Litwin, Alain H

Journal:

Clinical Infectious Diseases

Year:

2019

Language:

english

File:

PDF, 953 KB

english, 2019

40

Supervised enhancer prediction with epigenetic pattern recognition and targeted validation

Sethi, Anurag, Gu, Mengting, Gumusgoz, Emrah, Chan, Landon, Yan, Koon-Kiu, Rozowsky, Joel, Barozzi, Iros, Afzal, Veena, Akiyama, Jennifer A., Plajzer-Frick, Ingrid, Yan, Chengfei, Novak, Catherine S.,

Journal:

Year:

2020

File:

PDF, 5.27 MB

2020

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